BioDT Pandoc slide template

Author, Affiliation

Text formatting


Mathematics


Equations

  • Eq 1: \(e = mc^2\)
  • Eq 2: \(\frac{\partial^2 u}{\partial t^2} = c^2 \nabla^2 v\)

More equations

  • Eq 3 (centered):

\[\oint_{\partial \Sigma} E \cdot dl = - \int_\Sigma \frac{\partial B}{\partial t} \cdot d A\]

Nested lists 1


  • The beginning of a list, marked by a filled circle.
    • A list item, marked by an open circle.
      • A sub-item of said item.
  1. We can also create numbered lists, e.g. if we wanted several lists on a slide.
    • Under the list header, the first item marked by a filled circle.
      • And a sub-item marked by an open circle.
  2. This is another numbered list.
    • And this, the first item of that list.

Nested lists 2


  1. What if we wanted numbered sub-items within a numbered list?
    • This is also possible:
      1. Sub-item 1
      2. Sub-item 2
  2. Or other kinds of list variations?
    1. Now this item is numbered…
      • … Whereas this one isn’t.
  • Then there’s this one.
    1. I have a number!
    2. So do I…
      1. Don’t forget me!

Definition list


A term of interest
A definition of that term
Another term of interest
To define this term, more text is needed.
In fact, we need two rows to do it.

Function inputs and outputs


Function(input1, input2, input3, output1)
input1
If we wanted to make inputs and outputs easier to follow…
input2
We could use different colours for…
input3
Function inputs…
output1
And function outputs

Code examples


Some code in boxes:


import os

if os.path.isfile('foobar'):
    with open('foobar') as fp:
        txt = fp.read()
    print('File contents:')
    print(txt)
#include <stdio.h> 

int square(x) {
    printf("Going to square value %d.", x);
    return x*x;
}

Images


Screencap of the BioDT Twitter page.

Same image, but centered and smaller.

Columns 1


  • We can create side-by-side columns
    • Here we have the first of two…
  • This might be useful e.g. if we have a large horizontal image under the text.

Columns 2


  • A second option is to split text and images by column.
    • Another chance to advertise the BioDT Twitter page…

Tables 1


The default table format looks like this:


1 2 4 8
 Case 1 vanilla  0.757 0.719  0.574 0.547
optimised 0.899 0.838 0.658 0.607
 Case 2 vanilla  1.252 1.111  0.684 0.756
  optimised  1.443 1.277  0.748 0.818

Tables 2 (highlights)


We can also highlight different values in tables:


1 2 4 8
 Case 1 vanilla  0.757 0.719  0.574 0.547
optimised 0.899 0.838 0.658 0.607
 Case 2 vanilla  1.252 1.111  0.684 0.756
  optimised  1.443 1.277  0.748 0.818

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